DNA-RNA
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dR-DDQ1 phosphoramidite
CAS #
637330-15-5
Packing size
1g
The Deep Dark Quencher 1 is a dark and non-fluorescent quencher, based on methyl red, and can be incorporated into oligonucleotides at the 5’-terminus and the 3’-terminus. Dark Quencher is a molecule quenching the lower wavelength dyes such as fluorescein. Thus, for Double-Dye probes, this quencher is not suitable for quenching fluorescent dyes that emit at a higher wavelength.
Aspect
Red solid
Purity
>95%
Solubility
Dichloromethane, EtOAc, MeCN
Molecular weight
987,19
Molecular formula
C56H71N6O8P
IUPAC
(2R,3S,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-((6-(2-((E)-(4-(dimethylamino)phenyl)diazenyl)benzamido)hexyl)oxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
J. P. May et al., Org. Biomol. Chem., 2005, 3, 2534-2542. read article
C. M. McKeen, et al., Org. Biomol. Chem., 2003, 1, 2267-2275. read article